Sequence Similarity Clusters for the Entities in PDB 1EXD

Entity #1 | Chains: B
GLUTAMINE TRNA APTAMER rna, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
GLUTAMINYL-TRNA SYNTHETASE protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 14 3464
95 % 12 19 3004
90 % 12 19 3048
70 % 12 19 3023
50 % 13 21 2512
40 % 13 21 2494
30 % 13 21 2335

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.