Sequence Similarity Clusters for the Entities in PDB 1EXB

Entity #1 | Chains: A
KV BETA2 PROTEIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 3057
95 % 5 14 2839 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 14 2897
70 % 5 14 2862
50 % 5 14 2827
40 % 9 19 1201
30 % 303 365 99
Entity #2 | Chains: E
POTASSIUM CHANNEL KV1.1 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61552
95 % 1 1 50121
90 % 3 3 11346
70 % 7 10 2384
50 % 7 10 2363
40 % 7 11 2249
30 % 7 11 2113

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures