Sequence Similarity Clusters for the Entities in PDB 1EXB

Entity #1 | Chains: A
KV BETA2 PROTEIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 11 2434
95 % 5 14 2668 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 14 2718
70 % 5 14 2702
50 % 5 14 2668
40 % 5 14 2617
30 % 297 360 79
Entity #2 | Chains: E
POTASSIUM CHANNEL KV1.1 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69720
95 % 1 1 48104
90 % 3 3 13086
70 % 7 10 2269
50 % 7 10 2246
40 % 7 11 2158
30 % 7 11 2063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures