Sequence Similarity Clusters for the Entities in PDB 1EXB

Entity #1 | Chains: A
KV BETA2 PROTEIN protein, length: 332 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2691
95 % 5 13 2847 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 5 13 2892
70 % 5 13 2865
50 % 5 13 2838
40 % 5 13 2796
30 % 297 359 75
Entity #2 | Chains: E
POTASSIUM CHANNEL KV1.1 protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67864
95 % 1 1 46777
90 % 3 3 12744
70 % 7 10 2216
50 % 7 10 2194
40 % 7 11 2107
30 % 7 11 2024

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.