Sequence Similarity Clusters for the Entities in PDB 1EX4

Entity #1 | Chains: A,B
INTEGRASE protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40509
95 % 1 1 34168 Flexibility: Medium
Max RMSD: 4.8, Avg RMSD: 4.8
PDBFlex
90 % 1 1 32654
70 % 1 1 29122
50 % 1 1 24890
40 % 1 1 21880
30 % 1 1 17805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1EX4 1 A, B INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAINS 11676