Sequence Similarity Clusters for the Entities in PDB 1EUV

Entity #1 | Chains: A
ULP1 PROTEASE protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 21131
95 % 1 4 18411 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 4 18013
70 % 1 4 16692
50 % 1 4 14512
40 % 1 4 12936
30 % 1 4 11085
Entity #2 | Chains: B
UBITQUTIN-LIKE PROTEIN SMT3 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71233
95 % 1 5 10893 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 5 10747
70 % 1 5 10199
50 % 7 44 934
40 % 7 70 614
30 % 151 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures