Sequence Similarity Clusters for the Entities in PDB 1EUI

Entity #1 | Chains: A,B
URACIL-DNA GLYCOSYLASE protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 4217
95 % 12 13 2788 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 12 13 2846
70 % 13 14 2609
50 % 41 43 919
40 % 70 74 552
30 % 71 75 552
Entity #2 | Chains: C,D
URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 1111
95 % 11 12 1346 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 11 12 1368
70 % 11 12 1397
50 % 11 12 1442
40 % 11 12 1427
30 % 11 12 1423

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures