Sequence Similarity Clusters for the Entities in PDB 1EUI

Entity #1 | Chains: A,B
URACIL-DNA GLYCOSYLASE protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 3665
95 % 12 13 2695 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 12 13 2748
70 % 13 14 2580
50 % 41 43 880
40 % 68 71 553
30 % 69 72 545
Entity #2 | Chains: C,D
URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN protein, length: 84 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 962
95 % 11 12 1303 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 11 12 1328
70 % 11 12 1348
50 % 11 12 1396
40 % 11 12 1406
30 % 11 12 1383

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures