Sequence Similarity Clusters for the Entities in PDB 1EUD

Entity #1 | Chains: A
SUCCINYL-COA SYNTHETASE, ALPHA CHAIN protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8871
95 % 1 9 7945 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 9 7885
70 % 1 9 7661
50 % 3 24 1471
40 % 3 24 1472
30 % 3 24 1456
Entity #2 | Chains: B
SUCCINYL-COA SYNTHETASE, BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34872
95 % 1 8 8834 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.7
PDBFlex
90 % 1 8 8766
70 % 1 8 8425
50 % 1 9 6964
40 % 1 21 1574
30 % 1 21 1558

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures