Sequence Similarity Clusters for the Entities in PDB 1EUD

Entity #1 | Chains: A
SUCCINYL-COA SYNTHETASE, ALPHA CHAIN protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 8334
95 % 1 8 8655 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 8 8591
70 % 1 8 8249
50 % 3 23 1425
40 % 3 23 1440
30 % 3 23 1415
Entity #2 | Chains: B
SUCCINYL-COA SYNTHETASE, BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32867
95 % 1 8 8323 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.7
PDBFlex
90 % 1 8 8268
70 % 1 8 7941
50 % 1 8 7269
40 % 1 20 1559
30 % 1 20 1537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.