Sequence Similarity Clusters for the Entities in PDB 1EUC

Entity #1 | Chains: A
SUCCINYL-COA SYNTHETASE, ALPHA CHAIN protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 8556
95 % 2 8 8896 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 2 8 8819
70 % 2 8 8483
50 % 4 23 1461
40 % 4 23 1471
30 % 4 23 1441
Entity #2 | Chains: B
SUCCINYL-COA SYNTHETASE, BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 33870
95 % 2 8 8556 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.7
PDBFlex
90 % 2 8 8492
70 % 2 8 8179
50 % 2 8 7488
40 % 2 20 1601
30 % 2 20 1567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures