Sequence Similarity Clusters for the Entities in PDB 1EUC

Entity #1 | Chains: A
SUCCINYL-COA SYNTHETASE, ALPHA CHAIN protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 9263
95 % 2 9 8073 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 2 9 7999
70 % 2 9 7719
50 % 4 24 1481
40 % 4 24 1472
30 % 4 24 1460
Entity #2 | Chains: B
SUCCINYL-COA SYNTHETASE, BETA CHAIN protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 45550
95 % 2 8 10162 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.7
PDBFlex
90 % 2 8 10033
70 % 2 8 9526
50 % 2 9 7391
40 % 2 21 1595
30 % 2 21 1577

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures