Sequence Similarity Clusters for the Entities in PDB 1ETZ

Entity #1 | Chains: A,L
FAB NC10.14 - LIGHT CHAIN protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39305
95 % 19 39 507 Flexibility: Low
Max RMSD: 8.7, Avg RMSD: 2.3
PDBFlex
90 % 23 45 468
70 % 1441 2519 1
50 % 2940 5107 1
40 % 3354 5756 1
30 % 4125 7175 1
Entity #2 | Chains: B,H
FAB NC10.14 - HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39304
95 % 1 1 33203 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.8
PDBFlex
90 % 1 1 31791
70 % 1424 2478 2
50 % 2941 5107 1
40 % 3355 5756 1
30 % 4126 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures