1ETT

REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS


Sequence Similarity Clusters for the Entities in PDB 1ETT

Entity #1 | Chains: L
EPSILON-THROMBIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 17 1420
95 % 8 17 1920 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 1.8
PDBFlex
90 % 8 17 1969
70 % 8 17 1985
50 % 22 42 820
40 % 22 42 855
30 % 22 42 837
Entity #2 | Chains: H
EPSILON-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 22 1118
95 % 9 22 1525 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.2
PDBFlex
90 % 9 22 1552
70 % 309 403 45
50 % 309 403 77
40 % 1363 1669 4
30 % 1470 1811 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.