1ETR

REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS


Sequence Similarity Clusters for the Entities in PDB 1ETR

Entity #1 | Chains: L
EPSILON-THROMBIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 17 1548
95 % 2 17 2089
90 % 2 17 2141
70 % 2 17 2151
50 % 12 42 879
40 % 12 42 910
30 % 12 42 897
Entity #2 | Chains: H
EPSILON-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 1243
95 % 2 22 1671 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 2 22 1705
70 % 253 408 46
50 % 253 408 84
40 % 1302 1864 4
30 % 1310 1886 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures