1ETR

REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS


Sequence Similarity Clusters for the Entities in PDB 1ETR

Entity #1 | Chains: L
EPSILON-THROMBIN protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 17 1494
95 % 2 17 2002
90 % 2 17 2051
70 % 2 17 2057
50 % 12 42 854
40 % 12 42 885
30 % 12 42 871
Entity #2 | Chains: H
EPSILON-THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 22 1197
95 % 2 22 1608 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 2 22 1637
70 % 251 405 45
50 % 251 405 81
40 % 1197 1695 4
30 % 1286 1845 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.