Sequence Similarity Clusters for the Entities in PDB 1ETF

Entity #1 | Chains: A
REV RESPONSE ELEMENT RNA rna, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
REV PEPTIDE protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48763
95 % 1 2 40540
90 % 1 2 38603
70 % 1 2 34100
50 % 1 2 28981
40 % 1 2 25407
30 % 1 2 21154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures