Sequence Similarity Clusters for the Entities in PDB 1ERM

Entity #1 | Chains: A
TEM-1 BETA-LACTAMASE protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 2682
95 % 28 75 279 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 80 281
70 % 70 126 232
50 % 181 336 76
40 % 192 368 60
30 % 195 376 72

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures