Sequence Similarity Clusters for the Entities in PDB 1ERM

Entity #1 | Chains: A
TEM-1 BETA-LACTAMASE protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 10482
95 % 26 72 287 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 33 79 284
70 % 70 125 219
50 % 179 330 70
40 % 190 362 53
30 % 193 369 72

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures