Sequence Similarity Clusters for the Entities in PDB 1ERJ

Entity #1 | Chains: A,B,C
TRANSCRIPTIONAL REPRESSOR TUP1 protein, length: 393 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 25896
95 % 1 1 21920 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 1 2 13712
70 % 1 2 12906
50 % 1 2 11487
40 % 1 2 10424
30 % 1 2 9090

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures