Sequence Similarity Clusters for the Entities in PDB 1ER8

Entity #1 | Chains: E
Endothiapepsin protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 505 524 8
95 % 505 524 17 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 505 524 18
70 % 505 524 26
50 % 523 543 54
40 % 527 551 63
30 % 551 717 31
Entity #2 | Chains: I
H-77 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures