Sequence Similarity Clusters for the Entities in PDB 1ER8

Entity #1 | Chains: E
Endothiapepsin protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 510 529 11
95 % 510 529 18 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 510 529 20
70 % 510 529 27
50 % 528 548 67
40 % 532 556 86
30 % 562 738 30
Entity #2 | Chains: I
H-77 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures