Sequence Similarity Clusters for the Entities in PDB 1ER8

Entity #1 | Chains: E
Endothiapepsin protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 501 520 8
95 % 501 520 16 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.2
PDBFlex
90 % 501 520 17
70 % 501 520 26
50 % 519 539 50
40 % 523 547 58
30 % 547 707 28
Entity #2 | Chains: I
H-77 protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.