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X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION
Sequence Clustering and Redundancy Reduction Results
1EQZ
Sequence Clusters for the Sequence Entities in PDB 1EQZ
Entity #1: Chains: I,J - 146 NUCLEOTIDES LONG DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: A,E - PROTEIN (HISTONE H2A) protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 4363
95% 17 86 129
90% 20 92 106
70% 20 95 124
50% 22 101 150
40% 22 101 174
30% 22 101 192
Entity #3: Chains: B,F - PROTEIN (HISTONE H2B) protein, length: 126 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 5 5567
95% 18 86 131
90% 18 88 137
70% 20 94 128
50% 20 94 172
40% 20 94 193
30% 20 94 209
Entity #4: Chains: C,G - PROTEIN (HISTONE H3) protein, length: 136 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 14 1311
95% 26 98 98
90% 26 101 103
70% 26 101 123
50% 26 104 159
40% 26 104 181
30% 26 104 198
Entity #5: Chains: D,H - PROTEIN (HISTONE H4) protein, length: 103 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 23 84 92
95% 26 100 96
90% 26 104 95
70% 26 104 114
50% 26 104 153
40% 26 104 176
30% 26 104 195
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.