Sequence Similarity Clusters for the Entities in PDB 1EQZ

Entity #1 | Chains: I,J
146 NUCLEOTIDES LONG DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,E
PROTEIN (HISTONE H2A) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 5721
95 % 34 141 81
90 % 36 149 79
70 % 37 155 89
50 % 42 165 116
40 % 42 165 138
30 % 42 165 150
Entity #3 | Chains: B,F
PROTEIN (HISTONE H2B) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 7298
95 % 34 136 108
90 % 34 141 91
70 % 36 148 100
50 % 36 148 139
40 % 36 148 156
30 % 36 148 172
Entity #4 | Chains: C,G
PROTEIN (HISTONE H3) protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 19 1138
95 % 42 151 76
90 % 42 154 78
70 % 42 155 93
50 % 42 158 128
40 % 42 158 145
30 % 42 158 160
Entity #5 | Chains: D,H
PROTEIN (HISTONE H4) protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 142 62
95 % 44 161 74
90 % 44 166 73
70 % 44 166 86
50 % 44 166 122
40 % 44 166 140
30 % 44 166 154

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.