Sequence Similarity Clusters for the Entities in PDB 1EQZ

Entity #1 | Chains: I,J
146 NUCLEOTIDES LONG DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,E
PROTEIN (HISTONE H2A) protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 4930
95 % 26 115 115
90 % 29 124 109
70 % 30 128 117
50 % 33 135 133
40 % 33 135 145
30 % 33 135 165
Entity #3 | Chains: B,F
PROTEIN (HISTONE H2B) protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 6314
95 % 27 114 118
90 % 27 117 119
70 % 29 123 129
50 % 29 123 155
40 % 29 123 171
30 % 29 123 186
Entity #4 | Chains: C,G
PROTEIN (HISTONE H3) protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 16 1212
95 % 35 126 106
90 % 35 129 107
70 % 35 130 122
50 % 35 133 145
40 % 35 133 161
30 % 35 133 179
Entity #5 | Chains: D,H
PROTEIN (HISTONE H4) protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 32 117 89
95 % 36 135 99
90 % 36 140 84
70 % 36 140 98
50 % 36 140 134
40 % 36 140 146
30 % 36 140 167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.