Sequence Similarity Clusters for the Entities in PDB 1EQR

Entity #1 | Chains: A,B,C
ASPARTYL-TRNA SYNTHETASE protein, length: 590 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 11175
95 % 3 3 11130 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.9
PDBFlex
90 % 3 3 10979
70 % 3 3 10418
50 % 7 11 2742
40 % 7 12 2253
30 % 7 12 2145

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures