Sequence Similarity Clusters for the Entities in PDB 1EQN

Entity #1 | Chains: A,B,C,D,E
DNA PRIMASE protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 11595
95 % 4 4 8348 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 4 4 8278
70 % 4 4 7973
50 % 4 4 7318
40 % 4 4 6748
30 % 5 8 3569

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures