Sequence Similarity Clusters for the Entities in PDB 1EQN

Entity #1 | Chains: A,B,C,D,E
DNA PRIMASE protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 10630
95 % 4 4 7904 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 4 4 7845
70 % 4 4 7628
50 % 4 4 7034
40 % 4 4 6534
30 % 13 16 2434

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures