Sequence Similarity Clusters for the Entities in PDB 1EQF

Entity #1 | Chains: A
RNA POLYMERASE II TRANSCRIPTION INITIATION FACTOR protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26440
95 % 2 3 22196 Flexibility: Medium
Max RMSD: 10.7, Avg RMSD: 7.4
PDBFlex
90 % 2 3 21561
70 % 2 3 19792
50 % 2 3 17169
40 % 2 3 15325
30 % 2 3 13120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.