Sequence Similarity Clusters for the Entities in PDB 1EQD

Entity #1 | Chains: A
NITROPHORIN 4 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 40 1110
95 % 48 48 1107 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 48 54 886
70 % 48 54 931
50 % 48 54 974
40 % 65 76 726
30 % 65 79 598

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures