Sequence Similarity Clusters for the Entities in PDB 1EQB

Entity #1 | Chains: A,B,C,D
SERINE HYDROXYMETHYLTRANSFERASE protein, length: 417 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 8206
95 % 2 3 8271 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 3 4 6816
70 % 5 6 4966
50 % 55 59 608
40 % 91 104 259
30 % 91 106 258

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3GBX 1 A, B Serine hydroxymethyltransferase 90371 2.1.2.1 | Details
2 1DFO 1 A, B, C, D SERINE HYDROXYMETHYLTRANSFERASE 562 2.1.2.1 | Details
3 1EQB 1 A, B, C, D SERINE HYDROXYMETHYLTRANSFERASE 562 2.1.2.1 | Details
4 3G8M 1 A Serine hydroxymethyltransferase 562 2.1.2.1 | Details