Sequence Similarity Clusters for the Entities in PDB 1EQB

Entity #1 | Chains: A,B,C,D
SERINE HYDROXYMETHYLTRANSFERASE protein, length: 417 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18541
95 % 2 3 7828 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.5
PDBFlex
90 % 3 4 6477
70 % 5 6 4740
50 % 55 59 565
40 % 78 90 287
30 % 78 92 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures