Sequence Similarity Clusters for the Entities in PDB 1EPT

Entity #1 | Chains: A
PORCINE E-TRYPSIN protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75906
95 % 1 1 52736
90 % 1 1 49979
70 % 1 1 43744
50 % 1 1 37289
40 % 1 1 32830
30 % 1 1 27769
Entity #2 | Chains: B
PORCINE E-TRYPSIN protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73388
95 % 1 1 50713
90 % 1 1 48049
70 % 1 1 42083
50 % 1 1 35867
40 % 1 1 31616
30 % 1 1 26664
Entity #3 | Chains: C
PORCINE E-TRYPSIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 48793
95 % 2 6 13770 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 6 13538
70 % 2 6 12713
50 % 14 46 1103
40 % 15 55 964
30 % 15 55 945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures