Sequence Similarity Clusters for the Entities in PDB 1EPT

Entity #1 | Chains: A
PORCINE E-TRYPSIN protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74584
95 % 1 1 51869
90 % 1 1 49193
70 % 1 1 43075
50 % 1 1 36740
40 % 1 1 32346
30 % 1 1 27370
Entity #2 | Chains: B
PORCINE E-TRYPSIN protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72098
95 % 1 1 49873
90 % 1 1 47287
70 % 1 1 41439
50 % 1 1 35342
40 % 1 1 31154
30 % 1 1 26283
Entity #3 | Chains: C
PORCINE E-TRYPSIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47887
95 % 1 3 24848 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 24031
70 % 1 3 21843
50 % 13 43 1135
40 % 14 52 996
30 % 14 52 974

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures