Sequence Similarity Clusters for the Entities in PDB 1EPT

Entity #1 | Chains: A
PORCINE E-TRYPSIN protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46965
95 % 1 1 39034
90 % 1 1 37220
70 % 1 1 32985
50 % 1 1 28019
40 % 1 1 24569
30 % 1 1 20468
Entity #2 | Chains: B
PORCINE E-TRYPSIN protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 46966
95 % 1 1 39035
90 % 1 1 37221
70 % 1 1 32986
50 % 1 1 28020
40 % 1 1 24570
30 % 1 1 20469
Entity #3 | Chains: C
PORCINE E-TRYPSIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 11981
95 % 2 6 11555 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 6 11391
70 % 2 6 10763
50 % 14 46 1126
40 % 15 55 958
30 % 15 55 951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures