Sequence Similarity Clusters for the Entities in PDB 1EPT

Entity #1 | Chains: A
PORCINE E-TRYPSIN protein, length: 43 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73132
95 % 1 1 50924
90 % 1 1 48349
70 % 1 1 42391
50 % 1 1 36163
40 % 1 1 31846
30 % 1 1 26941
Entity #2 | Chains: B
PORCINE E-TRYPSIN protein, length: 82 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70665
95 % 1 1 48938
90 % 1 1 46451
70 % 1 1 40765
50 % 1 1 34773
40 % 1 1 30661
30 % 1 1 25862
Entity #3 | Chains: C
PORCINE E-TRYPSIN protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46890
95 % 1 3 24340 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 3 23554
70 % 1 3 21440
50 % 13 43 1112
40 % 14 52 978
30 % 14 52 951

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.