Sequence Similarity Clusters for the Entities in PDB 1EP5

Entity #1 | Chains: A,B,C
CAPSID PROTEIN C protein, length: 157 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 8104
95 % 1 3 8170 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 1 3 8094
70 % 1 3 7608
50 % 9 24 1192
40 % 9 24 1189
30 % 9 24 1186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1EP5 1 A, B, C CAPSID PROTEIN C C-TERMINAL DOMAIN 11036 3.4.21 | Details
2 1EP6 1 A, B, C CAPSID PROTEIN C C-TERMINAL DOMAIN 11036 3.4.21 | Details
3 3J0C 3 C, F, I, L Capsid protein C-terminal protease domain (UNP residues 114-275) 11036 3.4.21.90 | Details