Sequence Similarity Clusters for the Entities in PDB 1EP3

Entity #1 | Chains: A
DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26536
95 % 1 3 22290 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 1 5 10219
70 % 1 5 9708
50 % 1 5 8801
40 % 1 5 8061
30 % 72 87 283
Entity #2 | Chains: B
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 27080
95 % 1 3 22664 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 3 22005
70 % 1 5 9801
50 % 1 5 8890
40 % 1 5 8136
30 % 1 5 7178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.