Sequence Similarity Clusters for the Entities in PDB 1EP1

Entity #1 | Chains: A
DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26258
95 % 2 3 22073 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 5 10110
70 % 2 5 9618
50 % 2 5 8711
40 % 2 5 7978
30 % 75 87 280
Entity #2 | Chains: B
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26800
95 % 2 3 22444 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 3 21794
70 % 2 5 9711
50 % 2 5 8800
40 % 2 5 8053
30 % 2 5 7108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.