Sequence Similarity Clusters for the Entities in PDB 1EP1

Entity #1 | Chains: A
DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27419
95 % 2 3 22987 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 5 10559
70 % 2 5 10026
50 % 2 5 9079
40 % 2 5 8309
30 % 75 87 296
Entity #2 | Chains: B
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 27968
95 % 2 3 23364 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 3 22658
70 % 2 5 10127
50 % 2 5 9175
40 % 2 5 8393
30 % 2 5 7393

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures