Sequence Similarity Clusters for the Entities in PDB 1EP1

Entity #1 | Chains: A
DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25797
95 % 2 3 21656 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 4 13518
70 % 2 4 12708
50 % 2 4 11311
40 % 2 4 10255
30 % 75 86 281
Entity #2 | Chains: B
DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 26328
95 % 2 3 22018 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 2 3 21389
70 % 2 4 12818
50 % 2 4 11408
40 % 2 4 10342
30 % 2 4 8987

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.