Sequence Similarity Clusters for the Entities in PDB 1EOO

Entity #1 | Chains: C,D
DNA (5'-D(*GP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
TYPE II RESTRICTION ENZYME ECORV protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 23 801
95 % 25 31 779 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.8
PDBFlex
90 % 25 31 807
70 % 25 31 850
50 % 25 31 903
40 % 25 31 927
30 % 25 31 907

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1SX5 3 A, B Type II restriction enzyme EcoRV 562 3.1.21.4 | Details
2 5F8A 2 A, B Type-2 restriction enzyme EcoRV 562 3.1.21.4 | Details
3 1EON 3 A, B TYPE II RESTRICTION ENZYME ECORV 562 3.1.21.4 | Details
4 1SUZ 2 A, B Type II restriction enzyme EcoRV 562 3.1.21.4 | Details
5 1RVA 2 A, B PROTEIN (ECO RV (E.C.3.1.21.4)) 562 3.1.21.4 | Details
6 5HLK 1 A, B Type-2 restriction enzyme EcoRV 562 3.1.21.4 | Details
7 1B94 2 A, B RESTRICTION ENDONUCLEASE ECORV 562 3.1.21.4 | Details
8 1RVC 3 A, B PROTEIN (ECO RV (E.C.3.1.21.4)) 562 3.1.21.4 | Details
9 1BSU 3 A, B ENDONUCLEASE ECORV (3.1.21.4) 562 3.1.21.4 | Details
10 1BGB 2 A, B ECORV ENDONUCLEASE 562 3.1.21.4 | Details
11 1AZ0 2 A, B PROTEIN (TYPE II RESTRICTION ENZYME ECORV) 562 3.1.21.4 | Details
12 1RVB 2 A, B PROTEIN (ECO RV (E.C.3.1.21.4)) 562 3.1.21.4 | Details
13 1EO4 2 A, B TYPE II RESTRICTION ENZYME ECORV 562 3.1.21.4 | Details
14 1B97 2 A, B RESTRICTION ENDONUCLEASE ECORV 562 3.1.21.4 | Details
15 1EO3 2 A, B TYPE II RESTRICTION ENZYME ECORV 562 3.1.21.4 | Details
16 2B0E 2 A, B Type II restriction enzyme EcoRV 562 3.1.21.4 | Details
17 1RV5 2 A, B ECORV ENDONUCLEASE 562 3.1.21.4 | Details
18 1B95 2 A, B RESTRICTION ENDONUCLEASE ECORV 562 3.1.21.4 | Details
19 1BSS 2 A, B ECORV ENDONUCLEASE 562 3.1.21.4 | Details
20 2B0D 2 A, B Type II restriction enzyme EcoRV 562 3.1.21.4 | Details
21 1STX 3 A, B Type II restriction enzyme EcoRV COMPLEXED WITH CLEAVED DNA DUPLEX 562 3.1.21.4 | Details
22 1BUA 2 A, B ENDONUCLEASE ECORV 562 3.1.21.4 | Details
23 1SX8 2 A, B Type II restriction enzyme EcoRV 562 3.1.21.4 | Details
24 1B96 2 A, B RESTRICTION ENDONUCLEASE ECORV 562 3.1.21.4 | Details
25 1EOO 2 A, B TYPE II RESTRICTION ENZYME ECORV 562 3.1.21.4 | Details
26 1RVE 1 A, B ENDONUCLEASE EcoR V 562 3.1.21.4 | Details
27 1EOP 2 A, B TYPE II RESTRICTION ENZYME ECORV 562 3.1.21.4 | Details
28 1AZ3 1 A, B ECORV ENDONUCLEASE 562 3.1.21.4 | Details
29 1AZ4 1 A, B ECORV ENDONUCLEASE 562 3.1.21.4 | Details
30 4RVE 2 A, B, C PROTEIN (ECO RV (E.C.3.1.21.4)) 562 3.1.21.4 | Details
31 2RVE 2 A, B PROTEIN (ECO RV (E.C.3.1.21.4)) 562 3.1.21.4 | Details