Sequence Similarity Clusters for the Entities in PDB 1EOF

Entity #1 | Chains: A
POTASSIUM CHANNEL KV1.1 protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 29419
95 % 5 5 15819 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 5 15481
70 % 10 10 2398
50 % 10 10 2371
40 % 11 11 2261
30 % 11 11 2122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures