Sequence Similarity Clusters for the Entities in PDB 1EOB

Entity #1 | Chains: A
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5778
95 % 15 16 4179 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 15 16 4210
70 % 15 16 4142
50 % 47 52 236
40 % 47 52 257
30 % 47 52 264
Entity #2 | Chains: B
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5071
95 % 15 16 4144 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 15 16 4176
70 % 15 16 4111
50 % 51 56 235
40 % 51 56 256
30 % 51 56 263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures