Sequence Similarity Clusters for the Entities in PDB 1EOB

Entity #1 | Chains: A
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5873
95 % 15 16 4245 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 15 16 4274
70 % 15 16 4204
50 % 47 52 239
40 % 47 52 259
30 % 47 52 268
Entity #2 | Chains: B
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 12 5161
95 % 15 16 4212 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 15 16 4240
70 % 15 16 4174
50 % 51 56 238
40 % 51 56 258
30 % 51 56 267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures