Sequence Similarity Clusters for the Entities in PDB 1EO9

Entity #1 | Chains: A
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61172
95 % 12 16 4159 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 12 16 4187
70 % 12 16 4121
50 % 29 52 236
40 % 29 52 256
30 % 29 52 264
Entity #2 | Chains: B
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN; protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5047
95 % 12 16 4124 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 12 16 4153
70 % 12 16 4090
50 % 33 56 235
40 % 33 56 255
30 % 33 56 263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.