Sequence Similarity Clusters for the Entities in PDB 1EO9

Entity #1 | Chains: A
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 6019
95 % 12 16 4062 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 12 16 4115
70 % 12 16 4047
50 % 29 52 246
40 % 29 52 274
30 % 29 52 287
Entity #2 | Chains: B
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN; protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 16 4012
95 % 12 16 4360 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 12 16 4403
70 % 12 16 4299
50 % 33 56 248
40 % 33 56 277
30 % 33 56 289

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures