Sequence Similarity Clusters for the Entities in PDB 1EO8

Entity #1 | Chains: A
HEMAGGLUTININ (HA1 CHAIN) protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 13 1137
95 % 10 37 324
90 % 10 37 346
70 % 16 54 270
50 % 18 56 293
40 % 130 279 18
30 % 133 286 28
Entity #2 | Chains: B
HEMAGGLUTININ (HA2 CHAIN) protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 17 801
95 % 16 51 239
90 % 16 51 252
70 % 53 120 85
50 % 130 277 12
40 % 134 287 17
30 % 134 287 29
Entity #3 | Chains: L
ANTIBODY (LIGHT CHAIN) protein, length: 210 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58493
95 % 1 1 40829
90 % 54 145 139
70 % 1130 1803 2
50 % 2771 4435 1
40 % 2771 4435 1
30 % 3210 5225 1
Entity #4 | Chains: H
ANTIBODY (HEAVY CHAIN) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57788
95 % 1 1 40516
90 % 1 1 38657
70 % 1340 2145 1
50 % 2772 4435 1
40 % 2772 4435 1
30 % 3211 5225 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.