Sequence Similarity Clusters for the Entities in PDB 1EO2

Entity #1 | Chains: A
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 5839
95 % 16 16 4212 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 16 16 4240
70 % 16 16 4171
50 % 49 52 238
40 % 49 52 258
30 % 49 52 266
Entity #2 | Chains: B
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN protein, length: 241 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 12 5126
95 % 16 16 4177 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 16 16 4206
70 % 16 16 4140
50 % 53 56 237
40 % 53 56 257
30 % 53 56 265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures