Sequence Similarity Clusters for the Entities in PDB 1EMV

Entity #1 | Chains: A
IMMUNITY PROTEIN IM9 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 10 4125
95 % 10 18 2565
90 % 10 20 2132
70 % 11 23 1889
50 % 13 39 922
40 % 13 39 943
30 % 13 39 923
Entity #2 | Chains: B
COLICIN E9 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 11 3242
95 % 10 19 1702
90 % 10 19 1733
70 % 12 35 907
50 % 14 38 803
40 % 14 38 832
30 % 14 38 820

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.