Sequence Similarity Clusters for the Entities in PDB 1EMS

Entity #1 | Chains: A,B
NIT-FRAGILE HISTIDINE TRIAD FUSION PROTEIN protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38742
95 % 1 1 32817 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 31411
70 % 1 1 28101
50 % 1 1 24023
40 % 1 1 21148
30 % 1 1 17645

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures