Sequence Similarity Clusters for the Entities in PDB 1EMR

Entity #1 | Chains: A
LEUKEMIA INHIBITORY FACTOR protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62662
95 % 2 3 14218 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 13941
70 % 3 5 9675
50 % 3 5 8780
40 % 3 5 8042
30 % 3 5 7084

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.