Sequence Similarity Clusters for the Entities in PDB 1EMR

Entity #1 | Chains: A
LEUKEMIA INHIBITORY FACTOR protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65383
95 % 2 3 14872 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 14598
70 % 3 5 10129
50 % 3 5 9179
40 % 3 5 8401
30 % 3 5 7399

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures