Sequence Similarity Clusters for the Entities in PDB 1EMM

Entity #1 | Chains: A
GREEN FLUORESCENT PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56989
95 % 198 227 72 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.6
PDBFlex
90 % 209 265 37
70 % 212 269 47
50 % 213 270 82
40 % 214 271 99
30 % 392 484 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.