Sequence Similarity Clusters for the Entities in PDB 1EMI

Entity #1 | Chains: B
16S RIBOSOMAL RNA rna, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
RIBOSOMAL PROTEIN S8 protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 267 269 34
95 % 267 269 46
90 % 271 273 46
70 % 271 273 57
50 % 399 401 28
40 % 403 405 38
30 % 512 514 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.