Sequence Similarity Clusters for the Entities in PDB 1EMG

Entity #1 | Chains: A
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 8698
95 % 166 229 72 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.5
PDBFlex
90 % 175 267 37
70 % 178 271 47
50 % 178 272 82
40 % 179 273 99
30 % 299 486 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.