Sequence Similarity Clusters for the Entities in PDB 1EMG

Entity #1 | Chains: A
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 23 1029
95 % 186 255 70 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 198 297 38
70 % 201 301 33
50 % 201 303 79
40 % 206 316 96
30 % 328 531 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures