Sequence Similarity Clusters for the Entities in PDB 1EMG

Entity #1 | Chains: A
PROTEIN (GREEN FLUORESCENT PROTEIN) protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 23 1086
95 % 196 270 69 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 208 312 21
70 % 211 316 31
50 % 211 318 78
40 % 216 331 90
30 % 342 551 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures