Sequence Similarity Clusters for the Entities in PDB 1EMF

Entity #1 | Chains: A
GREEN FLUORESCENT PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39113
95 % 209 236 72 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 220 274 37
70 % 223 278 46
50 % 224 279 82
40 % 225 280 100
30 % 410 496 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.