Sequence Similarity Clusters for the Entities in PDB 1EMF

Entity #1 | Chains: A
GREEN FLUORESCENT PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39904
95 % 224 252 65 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 236 292 36
70 % 240 297 28
50 % 241 298 76
40 % 251 311 88
30 % 432 522 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures