Sequence Similarity Clusters for the Entities in PDB 1EMD

Entity #1 | Chains: A
MALATE DEHYDROGENASE protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 36174
95 % 4 7 3083 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 4 7 3133
70 % 4 10 1646
50 % 6 20 727
40 % 6 20 758
30 % 84 221 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.