Sequence Similarity Clusters for the Entities in PDB 1EMC

Entity #1 | Chains: A,B,C,D
GREEN FLUORESCENT PROTEIN protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 10307
95 % 203 230 74 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 214 268 37
70 % 217 272 47
50 % 218 273 83
40 % 219 274 100
30 % 401 489 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.