Sequence Similarity Clusters for the Entities in PDB 1EM6

Entity #1 | Chains: A,B
LIVER GLYCOGEN PHOSPHORYLASE protein, length: 847 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 1282
95 % 10 18 1620 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.6
PDBFlex
90 % 10 18 1651
70 % 189 215 148
50 % 189 215 180
40 % 201 232 167
30 % 201 232 180

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures