Sequence Similarity Clusters for the Entities in PDB 1EM1

Entity #1 | Chains: A,B
MANGANESE SUPEROXIDE DISMUTASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 17 1320
95 % 19 30 775 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 19 30 798
70 % 19 30 854
50 % 103 122 142
40 % 114 135 131
30 % 116 137 141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures