Sequence Similarity Clusters for the Entities in PDB 1EKZ

Entity #1 | Chains: B
STAUFEN DOUBLE-STRANDED RNA BINDING DOMAIN rna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
MATERNAL EFFECT PROTEIN (STAUFEN) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67333
95 % 1 1 46643
90 % 1 1 44371
70 % 1 1 39121
50 % 1 1 33513
40 % 1 1 29556
30 % 3 3 13577

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.