Sequence Similarity Clusters for the Entities in PDB 1EKZ

Entity #1 | Chains: B
STAUFEN DOUBLE-STRANDED RNA BINDING DOMAIN rna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
MATERNAL EFFECT PROTEIN (STAUFEN) protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73870
95 % 1 1 51117
90 % 1 1 48438
70 % 1 1 42431
50 % 1 1 36164
40 % 1 1 31865
30 % 3 3 14763

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures