Sequence Similarity Clusters for the Entities in PDB 1EKL

Entity #1 | Chains: A
PROTEIN (ANTIFREEZE PROTEIN TYPE III) protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 5243
95 % 14 33 1764 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 14 33 1806
70 % 15 36 1628
50 % 22 44 1211
40 % 22 44 1209
30 % 22 44 1205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures