Sequence Similarity Clusters for the Entities in PDB 1EK9

Entity #1 | Chains: A,B,C
OUTER MEMBRANE PROTEIN TOLC protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4624
95 % 1 11 1650 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 1 12 1505
70 % 1 12 1515
50 % 1 12 1574
40 % 1 12 1589
30 % 1 12 1557

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures