Sequence Similarity Clusters for the Entities in PDB 1EJV

Entity #1 | Chains: C
UREASE ALPHA SUBUNIT protein, length: 567 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51600
95 % 27 31 1797 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 27 31 1836
70 % 27 31 1861
50 % 40 49 930
40 % 40 49 958
30 % 40 49 933
Entity #2 | Chains: B
UREASE BETA SUBUNIT protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 31 1373
95 % 27 31 1838 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 27 31 1878
70 % 27 31 1905
50 % 27 31 1931
40 % 27 31 1935
30 % 27 31 1866
Entity #3 | Chains: A
UREASE GAMMA SUBUNIT protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 31 1375
95 % 27 31 1840 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 27 31 1880
70 % 40 44 1267
50 % 41 46 1084
40 % 41 46 1093
30 % 41 46 1073

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures