Sequence Similarity Clusters for the Entities in PDB 1EJM

Entity #1 | Chains: A,C,E
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 333 383 39
95 % 376 442 30 Flexibility: No
Max RMSD: 2.7, Avg RMSD: 0.4
PDBFlex
90 % 376 442 32
70 % 421 526 19
50 % 474 677 13
40 % 947 1669 4
30 % 1012 1811 6
Entity #2 | Chains: B,D,F
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 28853
95 % 57 90 232 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.6
PDBFlex
90 % 62 95 236
70 % 77 115 173
50 % 87 148 170
40 % 89 162 171
30 % 89 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.