Sequence Similarity Clusters for the Entities in PDB 1EJM

Entity #1 | Chains: A,C,E
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 333 383 40
95 % 376 442 31 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.4
PDBFlex
90 % 376 442 33
70 % 421 526 18
50 % 474 677 14
40 % 955 1682 4
30 % 1020 1831 6
Entity #2 | Chains: B,D,F
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29257
95 % 57 90 238 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 62 95 241
70 % 77 115 173
50 % 87 148 173
40 % 89 162 172
30 % 89 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.