Sequence Similarity Clusters for the Entities in PDB 1EJM

Entity #1 | Chains: A,C,E
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 351 403 27
95 % 394 462 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 394 462 21
70 % 439 546 19
50 % 492 697 14
40 % 980 1719 4
30 % 1045 1869 6
Entity #2 | Chains: B,D,F
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30444
95 % 57 90 255 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 62 95 260
70 % 77 115 177
50 % 87 149 182
40 % 89 163 178
30 % 89 163 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures