Sequence Similarity Clusters for the Entities in PDB 1EJM

Entity #1 | Chains: A,C,E
BETA-TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 334 384 40
95 % 377 443 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 377 443 34
70 % 422 527 19
50 % 475 678 14
40 % 958 1685 4
30 % 1023 1834 6
Entity #2 | Chains: B,D,F
PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29796
95 % 57 90 240 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 62 95 245
70 % 77 115 173
50 % 87 148 174
40 % 89 162 173
30 % 89 162 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.