Sequence Similarity Clusters for the Entities in PDB 1EJL

Entity #1 | Chains: A,B
SV40 LARGE T ANTIGEN NLS PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: I
IMPORTIN ALPHA protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 72 74 553
95 % 72 74 687 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.5
PDBFlex
90 % 82 85 586
70 % 82 85 627
50 % 108 114 432
40 % 111 118 450
30 % 112 119 433

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures