Sequence Similarity Clusters for the Entities in PDB 1EJI

Entity #1 | Chains: A,B,C,D
SERINE HYDROXYMETHYLTRANSFERASE protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17943
95 % 1 1 16380 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 8 8 3437
70 % 8 8 3389
50 % 13 13 2275
40 % 88 90 287
30 % 89 92 273

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures