Sequence Similarity Clusters for the Entities in PDB 1EJ7

Entity #1 | Chains: L
RUBISCO (LARGE SUBUNIT) protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51549
95 % 2 5 7461 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.4
PDBFlex
90 % 20 34 164
70 % 22 41 162
50 % 25 48 173
40 % 28 57 146
30 % 41 87 116
Entity #2 | Chains: S
RUBISCO (SMALL SUBUNIT) protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 15705
95 % 2 5 7916 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 2 5 7866
70 % 9 20 615
50 % 19 33 235
40 % 21 38 219
30 % 21 38 229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.